AISHWARYA, K and VINITHA, M.R and GEORGE , THOMAS (2015) A new species of Boesenbergia and rediscovery of B. rotunda (Zingiberaceae) from India. Phytotaxa, 197 (3). ISSN 1179-3163

Aswati, Nair.R and Kiran , A G and Sivakumar, K. C. and George , Thomas (2010) Molecular Characterization of an Oomycete-Responsive PR5 Protein Gene from Zingiber zerumbet. Plant Molecular Biology Reporter, 28. pp. 128-135. ISSN 0735-9640

Aswati Nair, R. and George, Thomas (2013) Molecular characterization of ZzR1 resistance gene from Zingiber zerumbet with potential for imparting Pythium aphanidermatum resistance in ginger. Gene, 516 (1). pp. 58-65. ISSN 1879-0038

Kavitha, P. G. and Kiran, A. G. and Dinesh Raj, R. and George, Thomas (2010) Amplified fragment length polymorphism analyses unravel a striking difference in the intraspecific genetic diversity of four species of genus Zingiber Boehm. From the Western Ghats... Current Science, 98 (2). pp. 242-247. ISSN 00113891

MAJU, T.T. and SONIYA, E.V. (2012) In vitro regeneration system for multiplication and transformation in P i per nigrum L. International Journal of Medicinal and Aromatic Plants, 2 (1). pp. 178-184. ISSN 2249-4340

Mani, T. and Manjula, S. (2010) Cloning and characterization of two osmotin isoforms from Piper colubrinum. Biologia Plantarum, 54 (2). pp. 377-380. ISSN 0006-3134

Sheeb, M.S. and Muneeb Hamz, K.H. and Asha, V.V (2014) Molecular diversities among Cardiospermum halicacabum Linn. populations in Kerala assessed using RAPD markers. Annals of Phytomedicine , 3 (2). pp. 87-92. ISSN 2 39 3 -9 88 5

Shweta , S. and Santhosh Kumar , T. R. (2014) Inhibition of fungal endophytes by camptothecine produced by their host plant, Nothapodytes nimmoniana (Grahm) Mabb. (Icacinaceae). CURRENT SCIENCE, 107 (6). ISSN 0011-3891

V, Gayathri and V.V., Asha (2011) Protection of immunocompromised mice from fungal infection with a thymus growth-stimulatory component from Selaginella involvens, a fern. Immunopharmacology and immunotoxicology, 33 (2). pp. 351-9. ISSN 1532-2513

Vinitha, M R and Suresh Kumar, U and George , Thomas (2014) Prospects for discriminating Zingiberaceae species in India using DNA barcodes. Journal of integrative plant biology, 56 (8). pp. 760-73. ISSN 1744-7909

A

Aiswarya, G and Mallika, V and EV, Soniya (2016) Ectopic expression and functional characterization of type III polyketide synthase mutants from Emblica officinalis Gaertn. Plant cell reports, 35 (10). pp. 2077-2090. ISSN 1432-203X

Aiswarya , Girija and Lovely Jael Paul Solomon, Devakumar and Mallika , Vijayanathan and Soniya , E V (2017) Nitric oxide as a bioactive molecule in the regulation of chalcone synthase during jasmonic acid mediated defense signaling in ginger. Plant Cell, Tissue and Organ Culture, 128 (3). 715-721 . ISSN 1573-5044

Anu, K and Chidambareswaren, M and Gayathri, GS and Manjula, S. (2015) Down-regulation of osmotin (PR5) gene by virus-induced gene silencing (VIGS) leads to susceptibility of resistant Piper colubrinum Link. to the oomycete pathogen Phytophthora capsici Leonian. Indian journal of experimental biology, 53 (6). -329-34. ISSN 0975-1009

Anu , Krishnan and Chidambareswaren , Mahadevan and Tomson, Mani and S, Manjula (2015) Virus-induced gene silencing (VIGS) for elucidation of pathogen defense role of serine/threonine protein kinase in the non-model plant Piper colubrinum Link. Plant Cell, Tissue and Organ Culture (PCTOC), 122. pp. 269-283. ISSN 1573-5044

Appian , Subramoniam and V .V., Asha and Sreejith P, Sasidharan (2012) Chlorophyll Revisited: Anti-inflammatory Activities of Chlorophyll a and Inhibition of Expression of TNF-α Gene by the Same. Inflammation, 35 (3). 959-966. ISSN 1573-2576

Asha, S and Soniya, E V (2017) The sRNAome mining revealed existence of unique signature small RNAs derived from 5.8SrRNA from Piper nigrum and other plant lineages. Scientific reports. ISSN 2045-2322

Asha, S and Soniya , EV (2016) Transfer RNA Derived Small RNAs Targeting Defense Responsive Genes Are Induced during Phytophthora capsici Infection in Black Pepper (Piper nigrum L.). Frontiers in plant science, 7 (767). ISSN 1664-462X

Asha, S. and Nisha, Joy and Soniya, E. V. (2013) In silico Characterisation and Phylogenetic Analysis of Two Evolutionarily Conserved miRNAs (miR166 and miR171) from Black Pepper (Piper nigrum L.). Plant Molecular Biology Reporter, 31 (3). pp. 707-718. ISSN 1572-9818

Aswati , R. Nair and George, Thomas (2012) Functional genetic diversity at nucleotide binding site (NBS) loci: Comparisons among soft rot resistant and susceptible Zingiber taxa. Biochemical Systematics and Ecology, 44. pp. 196-201. ISSN 0305-1978

Aswati Nair, R. and Kiran, A. G. and Sivakumar, K. C. and George , Thomas (2009) Molecular Characterization of an Oomycete-Responsive PR-5 Protein Gene from Zingiber zerumbet. Plant Molecular Biology Reporter. pp. 128-135. ISSN 0735-9640

C

CA , Poorna and SK, Maney and TR , Santhoshkumar and EV , Soniya (2011) Phytochemical analysis and in vitro screening for biological activities of Acanthus ilicifolius. Journal of Pharmacy Research , 4 (7). ISSN 0974-6943

Chidambareswaren , M and Manjula, S and Nisha , R. Nair (2014) Enhanced Heterologous Expression of Biologically Active Human Granulocyte Colony Stimulating Factor in Transgenic Tobacco BY-2 Cells by Localization to Endoplasmic Reticulum. Molecular biotechnology, 56 (9). pp. 849-862. ISSN 1559-0305

Chidambareswaren , Mahadevan and Anu, Krishnan and Gayathri G., Saraswathy and Arun , Surendran and Abdul , Jaleel and Manjula , S (2016) Transcriptome- Assisted Label-Free Quantitative Proteomics Analysis Reveals Novel Insights into Piper nigrum—Phytophthora capsici Phytopathosystem. Frontiers in plant science, 7 (785). ISSN 1664-462X

D

Dinesh Raj, R. and Kiran , A G and George , Thomas (2010) Population genetic structure and conservation priorities of Oryza rufipogon Griff. populations in Kerala, India. Current science , 98 (1). pp. 65-68. ISSN 0011-3891

E

Edayileveettil K , Radhakrishnan and Rintu T , Varghese and Soniya E , Vasudevan (2010) Unusual intron in the second exon of a Type III polyketide synthase gene of Alpinia calcarata Rosc. Genetics and molecular biology, 33 (1). pp. 141-145. ISSN 1678-4685

F

Franklin, Charles Jose and George , Thomas (2009) Genetic diversity and conservation of common bean (Phaseolus vulgaris L., Fabaceae) landraces in Nilgiris. Current Science, 97 (2). 227-235 . ISSN 0011-3891

G

Geethu, Thomas and George , Thomas (2010) MOLECULAR EVOLUTION OF A PR-5 PROTEIN GENE IN ZINGIBER SPECIES WITH CONTRASTING BREEDING SYSTEMS. ACM Publications Proceedings of the International Symposium on Biocomputing . ISSN ISBN: 978-1-60558-722-6

Geethu E., Thomas and Kiran A. , Geetha and Lesly , Augustine and George, Thomas (2016) Analyses between Reproductive Behavior, Genetic Diversity and Pythium Responsiveness in Zingiber spp. Reveal an Adaptive Significance for Hemiclonality. Frontiers in plant science, 7. ISSN 1664-462

Gokilavani , Thangavel and Saraswati, Nayar (2018) A Survey of MIKC Type MADS-Box Genes in Non-seed Plants: Algae, Bryophytes, Lycophytes and Ferns. Frontiers in plant science, 9. ISSN Lausanne : Frontiers Research Foundation, c 2010-

Greeshma, Tom and Sheena , Philip and V.V., Ashaa (2018) Preparation of an efficient and safe polymeric-magnetic nanoparticle delivery system for sorafenib in hepatocellular carcinoma. Life sciences, 206. pp. 10-21. ISSN 1879-0631

H

Harikrishnan, K (2015) Application of Metagenomics in Agriculture. Agriculture Bioinformatics (eds). pp. 295-318. ISSN ISBN: 978-93-83305-42-1

J

JANARDHANAN, A. and RINTU T., VARGHESE (2013) Biosynthesis of silver nanoparticles by a Bacillus sp. of marine origin. Materials Science-Poland, 31 (2). pp. 173-179. ISSN 2083-134X

Jisha , Satheesan and Anith K , Narayanan and Manjula , Sakunthala (2012) Induction of root colonization by Piriformospora indica leads to enhanced asiaticoside production in Centella asiatica. Mycorrhiza, 22 (3). 195-202. ISSN 1432-1890

K

Kiran , AyyanperumalGeetha and Sayuj, Koyyappurath and George, Thomas (2019) Transcriptional analysis and histochemistry reveal a dominant role for cell wall signaling in mediating Pythium myriotylum resistance in Zingiber zerumbet. Physiological and Molecular Plant Pathology, 106. pp. 7-15. ISSN 0885-5765

M

MS, Resmi and PJ, Vivek and EV, Soniya (2015) Over-expression of bael quinolone synthase in tobacco improves plant vigor under favorable conditions, drought, or salt stress. FEBS letters, 589 (3). pp. 332-341. ISSN 1873-3468

Mallika, V and Aiswarya , G and Gincy, PT and Remakanthan, A and Soniya , EV (2016) Type III polyketide synthase repertoire in Zingiberaceae: computational insights into the sequence, structure and evolution. Development genes and evolution, 226 (4). 269-285. ISSN 1432-041X

Mallika, Vijayan and Sivakumar, K C and Soniya , E V (2011) PKSIIIexplorer: TSVM approach for predicting Type III polyketide synthase proteins. Bioinformation, 6 (3). pp. 125-127. ISSN 0973-2063

Mallika, V and Sivakumar, K C and Jaichand, S and Soniya, EV (2010) Kernel based machine learning algorithm for the efficient prediction of type III polyketide synthase family of proteins. Journal of integrative bioinformatics, 7 (1). ISSN 1613-4516

Mallika, V. and Sivakumar, K.C. and Aiswarya, G. and E.V. , Soniya (2019) In silico approaches illustrate the evolutionary pattern and protein-small molecule interactions of quinolone synthase from Aegle marmelos Correa. Journal of biomolecular structure & dynamics, 37 (1). 195-209 . ISSN 1538-0254

Mallika , V and K.C. , Sivakumar and Aiswarya, G. and E.V., Soniya (2018) In silico approaches illustrate the evolutionary pattern and protein-small molecule interactions of quinolone synthase from Aegle marmelos Correa. Journal of biomolecular structure & dynamics. pp. 1-15. ISSN 1538-0254

Mariet, Jose and R. Dinesh, Raj and M. R., Vinitha and Remya , Madhu and George , Thomas and George , Varghese (2018) The Prehistoric Indian Ayurvedic Rice Shashtika Is an Extant Early Domesticate With a Distinct Selection History. Frontiers in plant science, 9. ISSN 1664-462X

N

Nisha , Joy and E. V., Soniya (2011) Microsatellite based analysis of genetic diversity of popular black pepper genotypes in South India. Genetica, 139 (8). pp. 1033-43. ISSN 1573-6857

Nisha , Joy and EV, Soniya (2012) Identification of an miRNA candidate reflects the possible significance of transcribed microsatellites in the hairpin precursors of black pepper. Functional & integrative genomics, 12 (2). pp. 387-395. ISSN Functional & integrative genomics

Nisha , Joy and S, Asha and V, Mallika and E V, Soniya (2013) De novo Transcriptome Sequencing Reveals a Considerable Bias in the Incidence of Simple Sequence Repeats towards the Downstream of ‘Pre-miRNAs’ of Black Pepper. PloS one, 8 (3). ISSN 1932-6203

Nisha , Joy and Y. P. Maimoonath, Beevi and E. V., Soniya (2018) A deeper view into the significance of simple sequence repeats in pre-miRNAs provides clues for its possible roles in determining the function of microRNAs. BMC genetics, 19 (1). ISSN 1471-2156

P

Padmanabhan, Jayanthi Vivek and E, Soniya (2013) CDPK1 from Ginger Promotes Salinity and Drought Stress Tolerance without Yield Penalty by Improving Growth and Photosynthesis in Nicotiana tabacum. PloS one, 8 (10). ISSN 1932-6203

Padmanabhan Jayanthi, Vivek and Mohankumar, Saraladevi Resmi and Sweda , Sreekumar and K. C. , Sivakumar and E V , Soniya (2017) Calcium-Dependent Protein Kinase in Ginger Binds with Importin-α through Its Junction Domain for Nuclear Localization, and Further Interacts with NAC Transcription Factor. Frontiers in plant science, 7 (1909). ISSN 1664-462X

Pallara J , Wills and VV, Asha (2012) Acute and subacute toxicity studies of Lygodium flexuosum extracts in rats. Asian Pacific Journal of Tropical Biomedicine, 2 (1). S200-S202. ISSN 2221-1691

R

Radhakrishnan, E. K. and Soniya, E. V. (2009) Molecular analysis of type III polyketide synthase (PKS) gene family from Zingiber officinale Rosc. African Journal of Plant Science, 3 (3). 044-048. ISSN 1996-0824

Ramesh J., Praseeja and Sreejith, P S. and V V. , Asha (2015) Studies on the apoptosis inducing and cell cycle regulatory effect of Cuscuta reflexa Roxb chloroform extract on human hepatocellular carcinoma cell line, Hep 3B. IJARNP, 8 (2). pp. 37-47. ISSN 1940-6223

Remakanthan, A. and Tara, G Menon and Soniya, E. V (2014) Somatic embryogenesis in banana (Musa acuminata AAA cv. Grand Naine): effect of explant and culture conditions. In Vitro Cellular & Developmental Biology - Plant, 50 (1). pp. 127-136. ISSN 1475-2689

Resmi, MS and EV, Soniya (2013) Identification and Characterization of a Type III Polyketide Synthase Involved in Quinolone Alkaloid Biosynthesis from Aegle marmelos Correa. The Journal of biological chemistry, 288 (10). 7271-7281. ISSN 1083-351X

Resmi , M.S. and E.V, Soniya (2012) Molecular cloning and differential expressions of two cDNA encoding Type III polyketide synthase in different tissues of Curcuma longa L. Gene, 491 (2). pp. 278-283. ISSN 1879-0038

Roshmi , Thomas and Rintu T., Varghese and E.V. , Soniya (2015) Antibacterial properties of silver nanoparticles synthesized by marine Ochrobactrum sp. Brazilian journal of microbiology :, 45 (4). pp. 1221-1227. ISSN 1678-4405

S

S., Jisha and S., Sreeja and S., Manjula (2011) In vitro & in vivo estrogenic activity of glycoside fractions of Solanum nigrum fruit. The Indian journal of medical research, 134 (3). pp. 369-374. ISSN 0971-5916

Saraswati, Nayar and Gokilavani , Thangavel (2021) CsubMADS1, a lag phase transcription factor, controls development of polar eukaryotic microalga Coccomyxa subellipsoidea C-169. The Plant Journal, 107 (4). pp. 1228-1242. ISSN 1365-313X (online)

Satheeshkumar, K and Soniya, E V (2009) Isolation of morphovariants through plant regeneration in Agrobacterium rhizogenes induced hairy root cultures of Plumbago rosea L. Indian Journal of Biotechnology, 8 (4). pp. 435-441. ISSN 0975-0967

Sheena , Philip and Greeshma, Tom and Asha, V. V (2018) Evaluation of the anti-inflammatory activity of Tinospora cordifolia (Willd.) Miers chloroform extract – a preclinical study. The Journal of pharmacy and pharmacology, 70 (8). pp. 1113-1125. ISSN 2042-7158

Sindhu , C. Unni and E. V., Soniya (2010) Transgenic Cucumis sativus Expressing the Hepatitis B Surface Antigen. Plant Molecular Biology Reporter, 28 (4). pp. 627-634. ISSN 1572-9818

Sindhu Chandrika, Unni and Padmanabhan Jayanthikumari , Vivek and Thakidiyil Thankappan, Maju and Rintu Thundiyil , Varghese and E V, Soniya (2012) Molecular cloning and characterization of fruit specific promoter from Cucumis sativus L. American Journal of Molecular Biology, 2012 (2). 132-139 . ISSN 2161-6663

Sojan , Jose and V. V., Asha (2015) Oldenlandia dineshii (Rubiaceae: Spermacoceae), a new species from the Palakkad Gap region of Western Ghats, India. Kew Bulletin. ISSN 0075-5974

Sonia, E.V and Lakshmi , Priya and Aswathy, U (2018) Biotech-Innovations for Food and Nutrition Security. Zero Hunger Policies and Perspectives. pp. 587-595. ISSN ISBN :978-93-87445-14-7

Sreejayan, U and Suresh, Kumar and George, Varghese and George , Thomas (2011) Stratification and population structure of the genetic resources of ancient medicinal rice (Oryza sativa L.) landrace Njavara. Genetic Resources and Crop Evolution, 58 (5). 697-711 . ISSN 0925-9864

Sreejith , P.S and Divya , Sankar and Praseeja , R.J and Asha , V.V. (2014) Effect of salt stress on seed germination and seedling growth of green gram. The Journal of Plant Pathology., 114. pp. 156-164. ISSN ISJN: 3752-1938

Sreejith , P.S. and Praseeja, R.J. and Asha , V.V. (2012) The apoptosis inducing effect of Glycosmis pentaphylla (Retz.) Correa and its influence on gene expression in hepatocellular carcinoma cell line, Hep3 B. Journal of ethnopharmacology, 139 (2). pp. 359-365. ISSN 1872-7573

Sreejith P. , Sasidharan and Asha, V. V (2017) In vitro pharmacological, in vivo toxicological and in silico molecular docking analysis of glycopentalone, a novel compound from Glycosmis pentaphylla (Retz.) Correa. Medicinal Chemistry Research, 26 (8). pp. 1697-1707. ISSN 1554-8120

Srinivasan, Asha and Sweda, Sreekumar and E. V, Soniya (2016) Unravelling the complexity of microRNA-mediated gene regulation in black pepper (Piper nigrum L.) using highthroughput small RNA profiling. Plant cell reports, 35(1). pp. 53-63. ISSN 1432-203X

Sudha, C. G. and Soniya, E. V. (2013) Agrobacterium rhizogenes mediated transformation of the medicinal plant Decalepis arayalpathra and production of 2-hydroxy-4-methoxy benzaldehyde. Plant Cell, Tissue and Organ Culture (PCTOC), 112 (2). pp. 217-226. ISSN 1573-5044

Sweda, Sreekumar and E. V., Soniya (2017) Artificial MicroRNAs Promote High-Level Production of Biomolecules Through Metabolic Engineering of Phenylpropanoid Pathway. CRITICAL REVIEWS IN PLANT SCIENCES, 36. pp. 353-366. ISSN 0735-2689

T

Tara G. , Menon and E . V. , Soniya (2014) Isolation and characterization of salt-induced genes from Rhizophora apiculata Blume, a true mangrove by suppression subtractive hybridization. Current Science, 107 (4). pp. 650-655. ISSN 0011-3891

Tomson, Mani and K. C., Sivakumar and S., Manjula (2012) Expression and Functional Analysis of Two Osmotin (PR5) Isoforms with Differential Antifungal Activity from Piper colubrinum: Prediction of Structure–Function Relationship by Bioinformatics Approach. Molecular biotechnology, 52 (3). pp. 251-261. ISSN 1559-0305

Tomson , Mani and S., Manjula (2011) Optimization of Agrobacterium-mediated transient gene expression and endogenous gene silencing in Piper colubrinum Link. by vacuum infiltration. Plant Cell, Tissue and Organ Culture (PCTOC), 105 (1). pp. 113-119. ISSN 1573-5044

V

V, Suresh and V, Sruthi and VV, Asha (2011) In vitro anti-inflammatory and anti-cancer activities of Cuscuta reflexa Roxb. Journal of ethnopharmacology, 134 (3). pp. 872-877. ISSN 1872-7573

V. , Mallika and K.C., Sivakumar and E.V., Soniya (2011) evolutionary Implications and physicochemical Analyses of selected proteins of Type III polyketide synthase Family. Evolutionary bioinformatics online, 7. pp. 41-53. ISSN 1176-9343

Varghese, G. and Jose, M. and Dinesh Raj, R. and George, Thomas and Omanakumari, N. (2014) Quantitative and molecular analyses reveal a deep genetic divergence between the ancient medicinal rice (Oryza sativa) Njavara and syntopic traditional cultivars. Annals of Applied Biology, 164 (1). pp. 95-106. ISSN 0003-4746

Vidhya Lakshmi , Das and Rintu T, Varghese and E. V., Soniya (2014) Extracellular synthesis of silver nanoparticles by the Bacillus strain CS 11 isolated from industrialized area. 3 Biotech, 4 (2). pp. 121-126. ISSN 2190-5738

Vishnu Sukumari, Nath and Sayuj , Koyyappurath and Teena, Elizabeth Alex and Alka, Nasser and George , Thomas and Lesly , Augustine (2019) Transcriptome-based mining and expression profiling of Pythium responsive transcription factors in Zingiber sp. Functional & integrative genomics, 19 (2). pp. 249-264. ISSN 1438-7948

W

Wills , PJ and VV, Asha (2012) Lygodium flexuosum extract down regulates the expression of proinflammatory cytokines in CCl4 -induced hepatotoxicity. Asian Pacific journal of tropical medicine, 5 (6). 421-426. ISSN 2352-4146